wangliu-iscas/guix-mirror
1
0
Fork 0
mirror of https://codeberg.org/guix/guix.git synced 2026-05-13 06:53:44 +00:00
Code Issues Packages Projects Releases Wiki Activity

gnu: r-seqminer: Add missing inputs.

Browse Source 
* gnu/packages/cran.scm (r-seqminer)[inputs]: Add bzip2, sqlite, and zstd:lib.
[properties]: Record updater-extra-inputs.

Change-Id: I3cce94e1368a3376185203b19cbd416ce05ceb44
This commit is contained in:
Ricardo Wurmus
2026-02-18 19:08:14 +01:00
committed by Andreas Enge
parent 484f1efbdc
commit 5bb61ded37
1 changed files with 4 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files

6
gnu/packages/cran.scm
View File

@@ -52926,6 +52926,9 @@ designs. Broman et al. (2018) <doi:10.1534/genetics.118.301595>.")
(sha256
(base32
"15dkh4wfszfrpfpwyhnwj3bnkjfxm17bp0grr1wf4h6zxj0jbkp5"))))
;; If these inputs are not found at configure time they will be built from
;; bundled sources.
(properties '((updater-extra-inputs . ("bzip2" "sqlite" "zstd"))))
(build-system r-build-system)
(arguments
(list
@@ -52940,8 +52943,7 @@ designs. Broman et al. (2018) <doi:10.1534/genetics.118.301595>.")
(string-append m "skip('skip')\n"))
((".*createSingleChromosomeVCFIndex.*" m)
(string-append m "skip('skip')\n"))))))))
(inputs
(list zlib))
(inputs (list bzip2 sqlite (list zstd "lib") zlib))
(native-inputs (list r-testthat))
(home-page "http://seqminer.genomic.codes")
(synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")