diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 21eb5ad22a7..c57e5b7c24e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -52926,6 +52926,9 @@ designs. Broman et al. (2018) .") (sha256 (base32 "15dkh4wfszfrpfpwyhnwj3bnkjfxm17bp0grr1wf4h6zxj0jbkp5")))) + ;; If these inputs are not found at configure time they will be built from + ;; bundled sources. + (properties '((updater-extra-inputs . ("bzip2" "sqlite" "zstd")))) (build-system r-build-system) (arguments (list @@ -52940,8 +52943,7 @@ designs. Broman et al. (2018) .") (string-append m "skip('skip')\n")) ((".*createSingleChromosomeVCFIndex.*" m) (string-append m "skip('skip')\n")))))))) - (inputs - (list zlib)) + (inputs (list bzip2 sqlite (list zstd "lib") zlib)) (native-inputs (list r-testthat)) (home-page "http://seqminer.genomic.codes") (synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")