Commit Graph

185780 Commits

Author SHA1 Message Date
Ricardo Wurmus
2ef51b7d6b gnu: r-s2: Conditionally skip tests on 32-bit platforms.
* gnu/packages/cran.scm (r-s2)[arguments]: On 32-bit platforms skip some
tests.

Change-Id: Ie1ce57ad4def078c58f33ceec21338b3fb1176f7
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
0590f006b3 gnu: r-collapse: Conditionally skip tests on 32-bit platforms.
* gnu/packages/cran.scm (r-collapse)[arguments]: On 32-bit platforms skip some
tests.

Change-Id: Idd64fe930fba5b4599324ac0757bad7b0cba695f
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
fb1d2b84bc gnu: r-cards: Conditionally skip one test.
* gnu/packages/cran.scm (r-cards)[arguments]: On 32-bit platforms skip one
test.

Change-Id: I7f0ade42f51290a862412dd3e280b6c42a81f654
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
252fd1e084 gnu: r-ggplot2: Conditionally skip one test.
* gnu/packages/cran.scm (r-ggplot2)[arguments]: On 32-bit platforms skip one
test.

Change-Id: Icc6d0d6046a18ed24e91e15294c49fb28b4cc12e
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
e822d35cf9 gnu: r-biocstyle: Do not build self-contained reports on 32-bit platforms.
* gnu/packages/bioconductor.scm (r-biocstyle)[arguments]: Conditionally add
phase 'prevent-pandoc-segfault.

Change-Id: I84ea57c44ceedb21e03050b4c48c9c05beedc7d7
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
42ce83d570 gnu: proj-9.3: Fix build on 32-bit platforms.
* gnu/packages/geo.scm (proj-9.3)[arguments]: Conditionally add phase
'patch-tests to skip broken tests on 32-bit platforms.

Change-Id: I953489a7ac6a6c577d898e677df77d4acf4499c8
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
d5d4bc5dd7 gnu: proj: Fix build on 32-bit platforms.
* gnu/packages/geo.scm (proj)[arguments]: Conditionally add phase
'patch-tests to skip broken tests on 32-bit platforms.

Change-Id: Idf6339181f9bad128b060c2178a07735abba1e0b
2026-04-25 09:10:06 +02:00
Ricardo Wurmus
5856139e25 gnu: netcdf: Fix build on 32-bit platforms.
* gnu/packages/maths.scm (netcdf)[arguments]: Conditionally pass CFLAGS to
ignore incompatible pointer types; conditionally update 'fix-tests phase to
skip two broken tests on 32-bit platforms.

Change-Id: Id5d149038275c152bbb30f0b155a2c2f7e05a76e
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
2529f0189c gnu: geos: Conditionally skip tests.
* gnu/packages/geo.scm (geos)[arguments]: Conditionally add phase
'disable-broken-tests on 32-bit platforms.

Change-Id: I9367519716ef309cb6f33e7455d4472ff5293478
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
9fb3815d03 gnu: r-coro: Conditionally skip one test.
* gnu/packages/cran.scm (r-coro)[arguments]: On 32-bit platforms skip one
test.

Change-Id: I828ec4eae53df79ed476bd761905b78ae12e45ee
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
d7747cd1de gnu: r-timechange: Conditionally skip one test.
* gnu/packages/cran.scm (r-timechange)[arguments]: On 32-bit platforms skip one
test.

Change-Id: Idb8298941382bc2447f780e17a125ed39fe889f5
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
75ad9ee227 gnu: r-bit64: Conditionally skip two tests.
* gnu/packages/cran.scm (r-bit64)[arguments]: On 32-bit platforms skip two
tests.

Change-Id: Iac69d9b9ab479e3756977b6669e4a9f2802233a0
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
6aafb662b0 gnu: r-data-table: Fix a test on 32 bit machines.
* gnu/packages/cran.scm (r-data-table)[arguments]: Conditionally add phase
'fix-bad-test.

Change-Id: Iad9887debcb8a3e65e8495faae778266e42f1ead
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
4ce9e9489f gnu: r-bit64: Update home-page field.
The home page here was for the ff package, not bit64.

* gnu/packages/cran.scm (r-bit64)[home-page]: Update to CRAN project page.

Change-Id: Idcc1972bfe594185cdee29d8b4e4e0259941e784
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
99e0431ad3 gnu: r-accept: Update to 1.0.2.
* gnu/packages/cran.scm (r-accept): Update to 1.0.2.
[propagated-inputs]: Add r-hardhat, r-tibble, r-tidyselect, r-vctrs, and r-vetiver.
[native-inputs]: Add r-spelling and r-testthat.

Change-Id: I6b4782f8beb8e23f5e8987e1f00f34edec59c4b5
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
0a8ac90c98 gnu: Add r-vetiver.
* gnu/packages/cran.scm (r-vetiver): New variable.

Change-Id: Ia60cb1ca09daf342a2b8df826ed5306ea51a284f
2026-04-25 09:10:05 +02:00
Ricardo Wurmus
9f3b950e28 gnu: Add r-rapidoc.
* gnu/packages/cran.scm (r-rapidoc): New variable.

Change-Id: Ia43f969774fbaf1bdff69767d872ab113583c5db
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
12f1d78e98 gnu: Add r-pins.
* gnu/packages/cran.scm (r-pins): New variable.

Change-Id: Ie69fde0b4252d7086a6dadab4645b7885b11f18f
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
c72fbe204b gnu: Add r-bundle.
* gnu/packages/cran.scm (r-bundle): New variable.

Change-Id: I7694f43e4aa4ebc421a0e946d5d3ddafd30aa3ef
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
bfbd074cbd gnu: r-bbotk: Update to 1.10.0.
* gnu/packages/cran.scm (r-bbotk): Update to 1.10.0.
[native-inputs]: Remove r-processx, r-redux, and r-rush.

Change-Id: I3add7f5c00d752277dfae3199a9b37509869485c
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
a21623b806 gnu: Add r-embed.
* gnu/packages/cran.scm (r-embed): New variable.

Change-Id: I33d35f8c58545f53c346cd656782c4ed526d17b4
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
88f0f5c2ed gnu: r-yardstick: Update to 1.4.0.
* gnu/packages/cran.scm (r-yardstick): Update to 1.4.0.
[properties]: Record updater-ignored-native-inputs.
[native-inputs]: Add r-epir, r-handtill2001, and r-orf.

Change-Id: I27ce3c780b776ff985df7eb72473011cbd5e93d3
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
42db217507 gnu: Add r-orf.
* gnu/packages/cran.scm (r-orf): New variable.

Change-Id: I422f1fa4341b6835d2fd57057c1e1df49a0ec335
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
d7d8316666 gnu: Add r-epir.
* gnu/packages/cran.scm (r-epir): New variable.

Change-Id: Ic2eba444f2f3cdac8420bfa6b391e763f62c7b4d
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
e6bdcfa53a gnu: Add r-handtill2001.
* gnu/packages/cran.scm (r-handtill2001): New variable.

Change-Id: I09e71b5286356b8c6d0cda0b6914e6af07074145
2026-04-25 09:10:04 +02:00
Ricardo Wurmus
ec349263a8 gnu: Add r-cereal.
* gnu/packages/cran.scm (r-cereal): New variable.

Change-Id: I3b5c8854f49c732cc003529e8a82f4a37bd6c5bf
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
42e132a8b3 gnu: r-s4vectors: Update to 0.48.1.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.48.1.

Change-Id: I8b856c0e0679262ec5be2a1ae655fd2aa9f6d263
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
f584cecb82 gnu: r-biocviews: Update to 1.78.2.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.78.2.

Change-Id: I3aa91454ea13045bb4f4ebe36700c5c36ee28816
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
228d875376 gnu: r-wiggleplotr: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.34.1.

Change-Id: I3e9df308ff374a62d2ae41eed6df7297411ee665
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
466aff2cb8 gnu: r-enmix: Update to 1.46.2.
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.46.2.

Change-Id: I04675d3351d71cf7132918f3840a236ba64ad2c0
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
6385c5c441 gnu: r-delayedarray: Update to 0.36.1.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.36.1.

Change-Id: I36e6c48575213cbdac4c7351bfd5fc49d2ca1faf
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
84770c7e42 gnu: r-stars: Update to 0.7-2.
* gnu/packages/cran.scm (r-stars): Update to 0.7-2.

Change-Id: If5583378486a10f644dd7b9098c332f290d4a765
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
aac1a32428 gnu: r-pbdmpi: Update to 0.5-5.
* gnu/packages/cran.scm (r-pbdmpi): Update to 0.5-5.

Change-Id: I34ade16a4af9530a59aaf0698c1baf82262a1a9f
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
88a4e08e10 gnu: r-mlr3: Update to 1.6.0.
* gnu/packages/cran.scm (r-mlr3): Update to 1.6.0.

Change-Id: I553b49832b9c56d43501edce7858abbd5c1062e7
2026-04-25 09:10:03 +02:00
Ricardo Wurmus
8570df17c1 gnu: r-lobstr: Update to 1.2.1.
* gnu/packages/cran.scm (r-lobstr): Update to 1.2.1.

Change-Id: If088ac344520b04407c7b6f0e32fa4fb02a4cda8
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
9da5376893 gnu: r-igraph: Update to 2.2.3.
* gnu/packages/cran.scm (r-igraph): Update to 2.2.3.

Change-Id: I23dfd5b2a7685014b7aa86cf46b0a999081cce3e
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
7d4aca5bf8 gnu: r-cpp11: Update to 0.5.4.
* gnu/packages/cran.scm (r-cpp11): Update to 0.5.4.

Change-Id: Ib0f6d7898c26fa5b5a38a2da27161cd6e954f7cd
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
868b465298 gnu: r-spatstat: Update to 3.6-0.
* gnu/packages/cran.scm (r-spatstat): Update to 3.6-0.

Change-Id: I05e18e899f11b9ed3227fd0234d97274dfa8b291
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
ddbabfc080 gnu: r-hardhat: Update to 1.4.3.
* gnu/packages/cran.scm (r-hardhat): Update to 1.4.3.

Change-Id: I92526d995ef4913a20ff879e99b079e27c7d0ef4
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
a571418b69 gnu: r-quanteda: Update to 4.4.
* gnu/packages/cran.scm (r-quanteda): Update to 4.4.

Change-Id: I72e65e0d8a40b9a46a3353a87663c85b2dc7e4fb
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
1e6830ad9b gnu: r-sccore: Update to 1.0.7.
* gnu/packages/cran.scm (r-sccore): Update to 1.0.7.
[propagated-inputs]: Remove r-seurat.

Change-Id: Ib8b66b4c26c2f06965d64f14ac561b319a422b2f
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
83f44b12d4 gnu: r-spamm: Update to 4.6.65.
* gnu/packages/cran.scm (r-spamm): Update to 4.6.65.

Change-Id: Id033c8d33ca69a7f44a7b6dd9806e534778b4cd0
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
c84eabf6a1 gnu: r-rio: Update to 1.3.0.
* gnu/packages/cran.scm (r-rio): Update to 1.3.0.
[native-inputs]: Remove r-jpeg.

Change-Id: Ie60d8e73148286b9cb0f1f5f2405f76aa3d8d22b
2026-04-25 09:10:02 +02:00
Ricardo Wurmus
9acda43804 gnu: r-nanonext: Update to 1.8.2.
* gnu/packages/cran.scm (r-nanonext): Update to 1.8.2.

Change-Id: I2587c0be9c892de4379e9f8b50eb9ec33df97f2f
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
218a7b7e31 gnu: r-ucminf: Update to 1.2.3.
* gnu/packages/cran.scm (r-ucminf): Update to 1.2.3.

Change-Id: I486976827be08ec03c45fef94b745befde3f6907
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
b0a8f9a599 gnu: r-statsexpressions: Update to 1.7.4.
* gnu/packages/cran.scm (r-statsexpressions): Update to 1.7.4.

Change-Id: I0b79a241393d26a8c026088b0e424b38e4472c9e
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
56b9212b76 gnu: r-recipes: Update to 1.3.2.
* gnu/packages/cran.scm (r-recipes): Update to 1.3.2.

Change-Id: Id2e16bce4db896983b3185c1c5b2e23196a793b5
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
593f9660d7 gnu: r-cvxr: Update to 1.8.2.
* gnu/packages/cran.scm (r-cvxr): Update to 1.8.2.

Change-Id: I2e8bda89edb439a667eb199abf7ae15b593b3071
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
4b3ae05086 gnu: r-circlize: Update to 0.4.18.
* gnu/packages/cran.scm (r-circlize): Update to 0.4.18.

Change-Id: I161c5eef8f7db52620ff87fc298ed5771cc914f8
2026-04-25 09:10:01 +02:00
Ricardo Wurmus
3554f77cfd gnu: r-geosphere: Update to 1.6-8.
* gnu/packages/cran.scm (r-geosphere): Update to 1.6-8.
[propagated-inputs]: Remove r-sp.

Change-Id: Ibb73b0b53cd78de120c604d75a0549820eb3200e
2026-04-25 09:10:01 +02:00