gnu: r-organismdbi: Update to 1.52.0.

* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.52.0.
[propagated-inputs]: Remove r-txdbmaker; add r-seqinfo.
[native-inputs]: Add r-txdbmaker.

Change-Id: I2f6457ad141147d4668f959b3ae65c564c563d6a
This commit is contained in:
Ricardo Wurmus
2025-11-25 13:33:47 +01:00
parent 1dd79352a9
commit f1395aca7c

View File

@@ -12200,14 +12200,14 @@ functionality of the @code{TxDb} packages (e.g.,
(define-public r-organismdbi
(package
(name "r-organismdbi")
(version "1.50.0")
(version "1.52.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "OrganismDbi" version))
(sha256
(base32
"1lcxyb1xk81i4x4xjpbnkpbk2zfsbgw01q93i17fgahyrx2aa0d4"))))
"180d26ri4r9fdzx1fvggif9yy6xgi1ys8zf11llhman65wwl1w6d"))))
(properties
'((upstream-name . "OrganismDbi")
(updater-ignored-native-inputs
@@ -12229,11 +12229,9 @@ functionality of the @code{TxDb} packages (e.g.,
r-iranges
r-rbgl
r-s4vectors
r-txdbmaker))
(native-inputs (list r-bsgenome-hsapiens-ucsc-hg19
r-knitr
r-rsqlite
r-runit))
r-seqinfo))
(native-inputs (list r-bsgenome-hsapiens-ucsc-hg19 r-knitr r-rsqlite
r-runit r-txdbmaker))
(home-page "https://bioconductor.org/packages/OrganismDbi")
(synopsis "Software to enable the smooth interfacing of database packages")
(description "The package enables a simple unified interface to several