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13 Commits
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7a3c73e1fd | ||
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11f4833e22 | ||
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9fd78590b1 | ||
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77b148455a | ||
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618c5a443a | ||
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757e1e406c | ||
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497faee79e |
2
.gitignore
vendored
2
.gitignore
vendored
@@ -2,3 +2,5 @@
|
||||
/xarray-data-870b5d7a9dbfa821423f1b88056890c22341f085.tar.gz
|
||||
/RGB.byte.tif
|
||||
/xarray-0.12.3.tar.gz
|
||||
/xarray-0.15.0.tar.gz
|
||||
/xarray-0.15.1.tar.gz
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
From 63fc5acba81601e473ead5c4e82de78b5ae61ad0 Mon Sep 17 00:00:00 2001
|
||||
From 75584dd2b3d7c7411220bb21ee751002d51498c7 Mon Sep 17 00:00:00 2001
|
||||
From: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
Date: Fri, 15 Mar 2019 22:31:18 -0400
|
||||
Subject: [PATCH 1/4] DOC: Don't download RGB.byte.tif during build.
|
||||
@@ -10,31 +10,31 @@ Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
2 files changed, 2 insertions(+), 2 deletions(-)
|
||||
|
||||
diff --git a/doc/gallery/plot_rasterio.py b/doc/gallery/plot_rasterio.py
|
||||
index 82d5ce61..24502f10 100644
|
||||
index 99eb1fd1..3d797296 100644
|
||||
--- a/doc/gallery/plot_rasterio.py
|
||||
+++ b/doc/gallery/plot_rasterio.py
|
||||
@@ -24,7 +24,7 @@ from rasterio.warp import transform
|
||||
@@ -23,7 +23,7 @@ from rasterio.warp import transform
|
||||
import xarray as xr
|
||||
|
||||
# Read the data
|
||||
-url = 'https://github.com/mapbox/rasterio/raw/master/tests/data/RGB.byte.tif'
|
||||
+url = 'RGB.byte.tif'
|
||||
-url = "https://github.com/mapbox/rasterio/raw/master/tests/data/RGB.byte.tif"
|
||||
+url = "RGB.byte.tif"
|
||||
da = xr.open_rasterio(url)
|
||||
|
||||
# Compute the lon/lat coordinates with rasterio.warp.transform
|
||||
diff --git a/doc/gallery/plot_rasterio_rgb.py b/doc/gallery/plot_rasterio_rgb.py
|
||||
index 23a56d5a..468e2bab 100644
|
||||
index 758d4cd3..f2a7b2db 100644
|
||||
--- a/doc/gallery/plot_rasterio_rgb.py
|
||||
+++ b/doc/gallery/plot_rasterio_rgb.py
|
||||
@@ -19,7 +19,7 @@ import matplotlib.pyplot as plt
|
||||
@@ -18,7 +18,7 @@ import matplotlib.pyplot as plt
|
||||
import xarray as xr
|
||||
|
||||
# Read the data
|
||||
-url = 'https://github.com/mapbox/rasterio/raw/master/tests/data/RGB.byte.tif'
|
||||
+url = 'RGB.byte.tif'
|
||||
-url = "https://github.com/mapbox/rasterio/raw/master/tests/data/RGB.byte.tif"
|
||||
+url = "RGB.byte.tif"
|
||||
da = xr.open_rasterio(url)
|
||||
|
||||
# The data is in UTM projection. We have to set it manually until
|
||||
--
|
||||
2.21.0
|
||||
2.21.1
|
||||
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
From 90f116ffbf6eb403d4ddd44e6b9bafddced99419 Mon Sep 17 00:00:00 2001
|
||||
From bc95d0d73a1ab2f25ce7074bf0de803892eced54 Mon Sep 17 00:00:00 2001
|
||||
From: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
Date: Fri, 15 Mar 2019 22:48:25 -0400
|
||||
Subject: [PATCH 2/4] DOC: Skip examples using unpackaged dependencies.
|
||||
@@ -9,19 +9,19 @@ Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
1 file changed, 2 insertions(+)
|
||||
|
||||
diff --git a/doc/io.rst b/doc/io.rst
|
||||
index 85cb73a0..60990627 100644
|
||||
index e9109432..3e95540c 100644
|
||||
--- a/doc/io.rst
|
||||
+++ b/doc/io.rst
|
||||
@@ -373,6 +373,7 @@ installed xarray can convert a ``DataArray`` into a ``Cube`` using
|
||||
:py:meth:`~xarray.DataArray.to_iris`:
|
||||
@@ -498,6 +498,7 @@ installed xarray can convert a ``DataArray`` into a ``Cube`` using
|
||||
:py:meth:`DataArray.to_iris`:
|
||||
|
||||
.. ipython:: python
|
||||
+ :verbatim:
|
||||
|
||||
da = xr.DataArray(np.random.rand(4, 5), dims=['x', 'y'],
|
||||
coords=dict(x=[10, 20, 30, 40],
|
||||
@@ -385,6 +386,7 @@ Conversely, we can create a new ``DataArray`` object from a ``Cube`` using
|
||||
:py:meth:`~xarray.DataArray.from_iris`:
|
||||
@@ -510,6 +511,7 @@ Conversely, we can create a new ``DataArray`` object from a ``Cube`` using
|
||||
:py:meth:`DataArray.from_iris`:
|
||||
|
||||
.. ipython:: python
|
||||
+ :verbatim:
|
||||
@@ -29,5 +29,5 @@ index 85cb73a0..60990627 100644
|
||||
da_cube = xr.DataArray.from_iris(cube)
|
||||
da_cube
|
||||
--
|
||||
2.21.0
|
||||
2.21.1
|
||||
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
From 46ca88294c55170c442417f7341571079f1bc2a9 Mon Sep 17 00:00:00 2001
|
||||
From aebdf7c14a3a7df2ab45467074b4dd6dacc8d682 Mon Sep 17 00:00:00 2001
|
||||
From: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
Date: Sat, 16 Mar 2019 02:59:15 -0400
|
||||
Subject: [PATCH 4/4] DOC: Don't print out conda/pip environment.
|
||||
Subject: [PATCH 3/4] DOC: Don't print out conda/pip environment.
|
||||
|
||||
Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
---
|
||||
@@ -9,23 +9,23 @@ Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
1 file changed, 7 deletions(-)
|
||||
|
||||
diff --git a/doc/conf.py b/doc/conf.py
|
||||
index 23766946..33bfcf9d 100644
|
||||
index 578f9cf5..a23031a0 100644
|
||||
--- a/doc/conf.py
|
||||
+++ b/doc/conf.py
|
||||
@@ -26,13 +26,6 @@ allowed_failures = set()
|
||||
@@ -32,13 +32,6 @@ allowed_failures = set()
|
||||
print("python exec:", sys.executable)
|
||||
print("sys.path:", sys.path)
|
||||
|
||||
-if 'conda' in sys.executable:
|
||||
- print('conda environment:')
|
||||
- subprocess.run(['conda', 'list'])
|
||||
-if "conda" in sys.executable:
|
||||
- print("conda environment:")
|
||||
- subprocess.run(["conda", "list"])
|
||||
-else:
|
||||
- print('pip environment:')
|
||||
- subprocess.run(['pip', 'list'])
|
||||
- print("pip environment:")
|
||||
- subprocess.run(["pip", "list"])
|
||||
-
|
||||
print("xarray: %s, %s" % (xarray.__version__, xarray.__file__))
|
||||
|
||||
with suppress(ImportError):
|
||||
--
|
||||
2.21.0
|
||||
2.21.1
|
||||
|
||||
@@ -1,26 +0,0 @@
|
||||
From 2b193b193b422b322a5f5e6475ce72d9a453fb9f Mon Sep 17 00:00:00 2001
|
||||
From: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
Date: Sat, 16 Mar 2019 02:42:37 -0400
|
||||
Subject: [PATCH 3/4] TST: Reduce required pytest-runner version.
|
||||
|
||||
Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
---
|
||||
setup.py | 2 +-
|
||||
1 file changed, 1 insertion(+), 1 deletion(-)
|
||||
|
||||
diff --git a/setup.py b/setup.py
|
||||
index f24392db..af5190f3 100644
|
||||
--- a/setup.py
|
||||
+++ b/setup.py
|
||||
@@ -25,7 +25,7 @@ CLASSIFIERS = [
|
||||
PYTHON_REQUIRES = '>=3.5'
|
||||
INSTALL_REQUIRES = ['numpy >= 1.12', 'pandas >= 0.19.2']
|
||||
needs_pytest = {'pytest', 'test', 'ptr'}.intersection(sys.argv)
|
||||
-SETUP_REQUIRES = ['pytest-runner >= 4.2'] if needs_pytest else []
|
||||
+SETUP_REQUIRES = ['pytest-runner >= 4.0'] if needs_pytest else []
|
||||
TESTS_REQUIRE = ['pytest >= 2.7.1']
|
||||
|
||||
DESCRIPTION = "N-D labeled arrays and datasets in Python"
|
||||
--
|
||||
2.21.0
|
||||
|
||||
78
0004-Use-drawstyle-instead-of-linestyle-in-plot.step.patch
Normal file
78
0004-Use-drawstyle-instead-of-linestyle-in-plot.step.patch
Normal file
@@ -0,0 +1,78 @@
|
||||
From 7c9e266e5a2460391700a54da1c14e35205536a6 Mon Sep 17 00:00:00 2001
|
||||
From: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
Date: Sat, 31 Aug 2019 04:24:59 -0400
|
||||
Subject: [PATCH 4/4] Use drawstyle instead of linestyle in plot.step.
|
||||
|
||||
Mixing the two is deprecated in Matplotlib 3.1, and breaks the doc build
|
||||
if warnings are set to errors (which they are in new IPython sphinx
|
||||
extensions.)
|
||||
|
||||
Signed-off-by: Elliott Sales de Andrade <quantum.analyst@gmail.com>
|
||||
---
|
||||
xarray/plot/plot.py | 18 +++++++++---------
|
||||
xarray/plot/utils.py | 4 ++--
|
||||
2 files changed, 11 insertions(+), 11 deletions(-)
|
||||
|
||||
diff --git a/xarray/plot/plot.py b/xarray/plot/plot.py
|
||||
index 98131887..302cac05 100644
|
||||
--- a/xarray/plot/plot.py
|
||||
+++ b/xarray/plot/plot.py
|
||||
@@ -329,7 +329,7 @@ def line(
|
||||
return primitive
|
||||
|
||||
|
||||
-def step(darray, *args, where="pre", linestyle=None, ls=None, **kwargs):
|
||||
+def step(darray, *args, where="pre", drawstyle=None, ds=None, **kwargs):
|
||||
"""
|
||||
Step plot of DataArray index against values
|
||||
|
||||
@@ -359,16 +359,16 @@ def step(darray, *args, where="pre", linestyle=None, ls=None, **kwargs):
|
||||
if where not in {"pre", "post", "mid"}:
|
||||
raise ValueError("'where' argument to step must be " "'pre', 'post' or 'mid'")
|
||||
|
||||
- if ls is not None:
|
||||
- if linestyle is None:
|
||||
- linestyle = ls
|
||||
+ if ds is not None:
|
||||
+ if drawstyle is None:
|
||||
+ drawstyle = ds
|
||||
else:
|
||||
- raise TypeError("ls and linestyle are mutually exclusive")
|
||||
- if linestyle is None:
|
||||
- linestyle = ""
|
||||
- linestyle = "steps-" + where + linestyle
|
||||
+ raise TypeError("ds and drawstyle are mutually exclusive")
|
||||
+ if drawstyle is None:
|
||||
+ drawstyle = ""
|
||||
+ drawstyle = "steps-" + where + drawstyle
|
||||
|
||||
- return line(darray, *args, linestyle=linestyle, **kwargs)
|
||||
+ return line(darray, *args, drawstyle=drawstyle, **kwargs)
|
||||
|
||||
|
||||
def hist(
|
||||
diff --git a/xarray/plot/utils.py b/xarray/plot/utils.py
|
||||
index 6eec7c6b..08991e08 100644
|
||||
--- a/xarray/plot/utils.py
|
||||
+++ b/xarray/plot/utils.py
|
||||
@@ -461,7 +461,7 @@ def _resolve_intervals_1dplot(xval, yval, xlabel, ylabel, kwargs):
|
||||
"""
|
||||
|
||||
# Is it a step plot? (see matplotlib.Axes.step)
|
||||
- if kwargs.get("linestyle", "").startswith("steps-"):
|
||||
+ if kwargs.get("drawstyle", "").startswith("steps-"):
|
||||
|
||||
# Convert intervals to double points
|
||||
if _valid_other_type(np.array([xval, yval]), [pd.Interval]):
|
||||
@@ -472,7 +472,7 @@ def _resolve_intervals_1dplot(xval, yval, xlabel, ylabel, kwargs):
|
||||
yval, xval = _interval_to_double_bound_points(yval, xval)
|
||||
|
||||
# Remove steps-* to be sure that matplotlib is not confused
|
||||
- del kwargs["linestyle"]
|
||||
+ del kwargs["drawstyle"]
|
||||
|
||||
# Is it another kind of plot?
|
||||
else:
|
||||
--
|
||||
2.21.1
|
||||
|
||||
@@ -1,9 +1,11 @@
|
||||
%global srcname xarray
|
||||
%global data_commit 870b5d7a9dbfa821423f1b88056890c22341f085
|
||||
|
||||
%bcond_with docs
|
||||
|
||||
Name: python-%{srcname}
|
||||
Version: 0.12.3
|
||||
Release: 1%{?dist}
|
||||
Version: 0.15.1
|
||||
Release: 2%{?dist}
|
||||
Summary: N-D labeled arrays and datasets in Python
|
||||
|
||||
License: ASL 2.0
|
||||
@@ -15,21 +17,27 @@ Source2: https://github.com/mapbox/rasterio/raw/1.0.21/tests/data/RGB.byt
|
||||
# All Fedora specific.
|
||||
Patch0001: 0001-DOC-Don-t-download-RGB.byte.tif-during-build.patch
|
||||
Patch0002: 0002-DOC-Skip-examples-using-unpackaged-dependencies.patch
|
||||
Patch0003: 0003-TST-Reduce-required-pytest-runner-version.patch
|
||||
Patch0004: 0004-DOC-Don-t-print-out-conda-pip-environment.patch
|
||||
Patch0003: 0003-DOC-Don-t-print-out-conda-pip-environment.patch
|
||||
# https://github.com/pydata/xarray/pull/3274
|
||||
Patch0004: 0004-Use-drawstyle-instead-of-linestyle-in-plot.step.patch
|
||||
|
||||
BuildArch: noarch
|
||||
|
||||
BuildRequires: python3-devel
|
||||
BuildRequires: python3dist(cftime) >= 1
|
||||
BuildRequires: python3-dask+array
|
||||
BuildRequires: python3-dask+dataframe
|
||||
BuildRequires: python3dist(numpy) >= 1.12
|
||||
BuildRequires: python3dist(pandas) >= 0.19.2
|
||||
BuildRequires: python3dist(netcdf4) >= 1.4
|
||||
BuildRequires: python3dist(numpy) >= 1.15
|
||||
BuildRequires: python3dist(pandas) >= 0.25
|
||||
BuildRequires: python3dist(pint)
|
||||
BuildRequires: python3dist(pytest) >= 2.7.1
|
||||
BuildRequires: python3dist(pytest-runner)
|
||||
BuildRequires: python3dist(pytest-xdist)
|
||||
BuildRequires: python3dist(rasterio) >= 1
|
||||
BuildRequires: python3dist(seaborn)
|
||||
BuildRequires: python3dist(setuptools)
|
||||
BuildRequires: python3dist(setuptools) >= 41.2
|
||||
BuildRequires: python3dist(setuptools-scm)
|
||||
BuildRequires: python3dist(zarr) >= 2.3
|
||||
|
||||
%global _description %{expand: \
|
||||
Xarray (formerly xray) is an open source project and Python package that
|
||||
@@ -57,37 +65,99 @@ Summary: %{summary}
|
||||
%description -n python3-%{srcname} %{_description}
|
||||
|
||||
|
||||
%if %{with docs}
|
||||
%package -n python-%{srcname}-doc
|
||||
Summary: xarray documentation
|
||||
|
||||
BuildRequires: python3dist(cartopy)
|
||||
BuildRequires: natural-earth-map-data-110m
|
||||
BuildRequires: natural-earth-map-data-10m
|
||||
BuildRequires: python3-ipython-sphinx
|
||||
BuildRequires: python3dist(jupyter-client)
|
||||
BuildRequires: python3dist(matplotlib)
|
||||
BuildRequires: python3dist(netcdf4)
|
||||
BuildRequires: python3dist(numpydoc)
|
||||
BuildRequires: python3dist(rasterio)
|
||||
BuildRequires: python3dist(sphinx)
|
||||
BuildRequires: python3dist(sphinx-gallery)
|
||||
BuildRequires: python3dist(sphinx-rtd-theme)
|
||||
BuildRequires: python3dist(zarr)
|
||||
|
||||
%description -n python-%{srcname}-doc
|
||||
Documentation for xarray
|
||||
%endif
|
||||
|
||||
|
||||
%prep
|
||||
%autosetup -n %{srcname}-%{version} -p1
|
||||
|
||||
%if %{with docs}
|
||||
# Provide example datasets for building docs.
|
||||
tar xf %SOURCE1 --transform='s~^\(%{srcname}-data-%{data_commit}/\)~\1.xarray_tutorial_data/~'
|
||||
cp -p %SOURCE2 ./doc/gallery/
|
||||
|
||||
# Remove bundled egg-info
|
||||
rm -rf %{srcname}.egg-info
|
||||
%endif
|
||||
|
||||
|
||||
%build
|
||||
%py3_build
|
||||
|
||||
%if %{with docs}
|
||||
# generate html docs
|
||||
pushd doc
|
||||
PYTHONPATH=${PWD}/.. HOME=${PWD}/../%{srcname}-data-%{data_commit} make html
|
||||
# remove the sphinx-build leftovers
|
||||
rm -rf _build/html/.{doctrees,buildinfo}
|
||||
popd
|
||||
%endif
|
||||
|
||||
|
||||
%install
|
||||
%py3_install
|
||||
|
||||
|
||||
%check
|
||||
%{__python3} setup.py test --addopts='-ra -n auto -m "not network"'
|
||||
rm -rf xarray
|
||||
PYTHONPATH=%{buildroot}%{python3_sitelib} \
|
||||
pytest-3 -ra -n auto -m "not network" --pyargs xarray
|
||||
|
||||
|
||||
%files -n python3-%{srcname}
|
||||
%license LICENSE licenses/DASK_LICENSE licenses/NUMPY_LICENSE licenses/PANDAS_LICENSE licenses/PYTHON_LICENSE licenses/SEABORN_LICENSE
|
||||
%doc README.rst
|
||||
%{python3_sitelib}/%{srcname}
|
||||
%{python3_sitelib}/%{srcname}-%{version}-py?.?.egg-info
|
||||
%{python3_sitelib}/%{srcname}-%{version}-py*.egg-info
|
||||
|
||||
%if %{with docs}
|
||||
%files -n python-%{srcname}-doc
|
||||
%doc doc/_build/html
|
||||
%license LICENSE licenses/DASK_LICENSE licenses/NUMPY_LICENSE licenses/PANDAS_LICENSE licenses/PYTHON_LICENSE licenses/SEABORN_LICENSE
|
||||
%endif
|
||||
|
||||
|
||||
%changelog
|
||||
* Sat Apr 18 2020 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.15.1-2
|
||||
- Fix broken install with missing files
|
||||
- Test against installed version to catch above issue
|
||||
- Add more test dependencies
|
||||
|
||||
* Wed Mar 25 2020 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.15.1-1
|
||||
- Update to latest version
|
||||
|
||||
* Fri Mar 06 2020 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.15.0-2
|
||||
- Backport fix for seaborn 0.10.0
|
||||
|
||||
* Sat Feb 08 2020 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.15.0-1
|
||||
- Update to latest version
|
||||
|
||||
* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.12.3-4
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
|
||||
|
||||
* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 0.12.3-3
|
||||
- Rebuilt for Python 3.8
|
||||
|
||||
* Fri Jul 26 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.12.3-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
|
||||
|
||||
* Sun Jul 21 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.12.3-1
|
||||
- Update to latest version
|
||||
|
||||
|
||||
2
sources
2
sources
@@ -1,3 +1,3 @@
|
||||
SHA512 (xarray-0.12.3.tar.gz) = bac585362920f22b128ea75d5434ff1e9494cc4b8bafbb11533e80f3e09fe18e580e3e0dd9696bd906ac552ce5eb134e92019f6d2a7b1af0d38d27ac6589a846
|
||||
SHA512 (xarray-0.15.1.tar.gz) = 8a2d7e9173c51c65ffe856fa83df730e0e7de9777726c6d6e8f7f4edcc512b3a980c7dc854c19d3bc4bec50e815ad776bd433a5750680f2851a2b0b1f505ea14
|
||||
SHA512 (xarray-data-870b5d7a9dbfa821423f1b88056890c22341f085.tar.gz) = 27de6e274d18d266d6d8a1f0c8f65396fff16d177cf6df41cfd4bcf839e6d083512c4f4dbc1163ab7380a8905acecfe15b7978e23b9c360bad2dd879addb421c
|
||||
SHA512 (RGB.byte.tif) = 34aa1b196f6c5880530d42ec8a25193bc79db803a8427adc9b115373d222b9f4318a04f06c8b37118df7e09d96b9c470ecec543c604af18861f11b786ed6fbfd
|
||||
|
||||
Reference in New Issue
Block a user